Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911498.1_cds_XP_016461472.1_54789
CDS Infomation

[gene=LOC107784803] [db_xref=GeneID:107784803] [protein=cytokinin hydroxylase-like] [protein_id=XP_016461472.1] [location=complement(join(57247..57675,58720..59316,59651..59880,59987..60296))] [gbkey=CDS]
Sequence

ATGGAGTTTAAACAGTTTTCTCAAGTTGCTATCCTGCTAGGCATGGTTGTCATTCTTATT
TTCTTTGTATTATGTAAAGTATTATATTCTTGGTTGGTGCTGCCCAAACTGAAATATCAG
AAGCTTAAGGAAAATGGATTTGAGGGACCAGCACCAAGTTTCCCTCTTGGAAATATTAAC
GAAATGAAGAAGGAGCTGATGAACACAGCTTCTTCTGCTACTTCGTCACCTTCTCTTTCT
GCCTTAAAAATTAGCCATGATATCCATTCATTGGCATTTCCATACTTCGCTAAGTGGCAG
AAATTACATGGAAAAGTATTTATATACTGGCTGGGAACAGAACCATTTGTTTACATAGCA
GACCCTGAATTCATAAAGAAGATGTCTGCGGGAGTAATGGGCAAAAGTTGGGGGAAGCCA
ACAGTGTTTAAGAGGGACAGAAAGGCCATGTTTGGTAAAGGGTTGGTTATGGTGGAAGGA
GATGAATGGGTGAGACACAGGCATCTTATCACTCCCGCTTTTACCCAAGCCAACGTCAAG
GGCATGGCAAGCTTAATGGCGGAATCCGCAAAAAACATGCTAGACCGTTGGACTGCTCTC
ATCGACTCCGGGAACCCAGAAATCAATGTGGAGAAGGAAATAATTAACACGGCGGGAGAA
ATCATAGCAAAGACAAGCTTCGGCATCAACTACGAAAATGGAGAAAAAGTTTTTAACAAA
TTGAGAAGCATGCAATTCACACTTTTCAAGTCCACTCGTTATGTCGGGGTACCATATGGC
AACCTCATTATGTGCCCTAAAGAGACTCTAAAAGCTCATAATCTAGGGATGGAGATCGAT
TCTCTACTCATGTCGATCATTGAAGATCGAAAAAAGATGAAAAAAGATGATCTTGCACAG
CACGATCTTCTTAGTCTGTTGCTGGCAGGGAACGGGAAGACATTGAGTACGAGGGAACTA
GTGGATGAGTGTAAAACGTTTTTCTTCGGAGGACATGAGACCACTGCGCTGGCACTCACG
TGGACTTTGTTGCTGTTGGCAGTTCATACAGAATGGCAAACTCAGCTCAGAGAGGAAATC
AAACAAGTGATGGGTGATGCTGAAATTGATCCCATAAGACTTGCTTGTCTAAGAAAGATG
GGATGGGTGATTAATGAAGTACTAAGACTATACTCACCTGCACCAAATGTACAAAGGCAA
ACTAGAGAAGACATTCAAGTAGACAACCTAGTCATCCCCAAAGGAACAAATATATGGATT
GATTTGGTGTCCATGCATCACGACAAGCAACTTTGGGGCGAAGACGTGAATGAATTCAAA
CCAGAAAGGTTCAAGGATGACATGATACATGGCGGATGTAAACACAAAATGGGATATTTG
CCTTTTGGTTTTGGAGGAAGGATGTGCATTGGTAGGAATTTGACAATGATGGAGTACAAA
GTTGTCTTGTTTTTAATCTTGACAAACTTCTCCTTTTCCATTTCACCTAACTATAGACAC
TGCCCTTCTATCATGCTTTCTCTTAGGCCCACACTAGGATTGCCTCTTATACTCCAACCT
CTTTAG

Peptide Sequence

PEP ID

XP_016461472.1
PEP Infomation

PREDICTED: cytokinin hydroxylase-like [Nicotiana tabacum]
Sequence

MEFKQFSQVAILLGMVVILIFFVLCKVLYSWLVLPKLKYQKLKENGFEGPAPSFPLGNIN
EMKKELMNTASSATSSPSLSALKISHDIHSLAFPYFAKWQKLHGKVFIYWLGTEPFVYIA
DPEFIKKMSAGVMGKSWGKPTVFKRDRKAMFGKGLVMVEGDEWVRHRHLITPAFTQANVK
GMASLMAESAKNMLDRWTALIDSGNPEINVEKEIINTAGEIIAKTSFGINYENGEKVFNK
LRSMQFTLFKSTRYVGVPYGNLIMCPKETLKAHNLGMEIDSLLMSIIEDRKKMKKDDLAQ
HDLLSLLLAGNGKTLSTRELVDECKTFFFGGHETTALALTWTLLLLAVHTEWQTQLREEI
KQVMGDAEIDPIRLACLRKMGWVINEVLRLYSPAPNVQRQTREDIQVDNLVIPKGTNIWI
DLVSMHHDKQLWGEDVNEFKPERFKDDMIHGGCKHKMGYLPFGFGGRMCIGRNLTMMEYK
VVLFLILTNFSFSISPNYRHCPSIMLSLRPTLGLPLILQPL

Transcript Sequence

Gene sequence data has not been registered.